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diff --git a/libraries/spongycastle/core/src/main/java/org/spongycastle/pqc/crypto/rainbow/RainbowKeyPairGenerator.java b/libraries/spongycastle/core/src/main/java/org/spongycastle/pqc/crypto/rainbow/RainbowKeyPairGenerator.java
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+++ b/libraries/spongycastle/core/src/main/java/org/spongycastle/pqc/crypto/rainbow/RainbowKeyPairGenerator.java
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+package org.spongycastle.pqc.crypto.rainbow;
+
+import java.security.SecureRandom;
+
+import org.spongycastle.crypto.AsymmetricCipherKeyPair;
+import org.spongycastle.crypto.AsymmetricCipherKeyPairGenerator;
+import org.spongycastle.crypto.KeyGenerationParameters;
+import org.spongycastle.pqc.crypto.rainbow.util.ComputeInField;
+import org.spongycastle.pqc.crypto.rainbow.util.GF2Field;
+
+/**
+ * This class implements AsymmetricCipherKeyPairGenerator. It is used
+ * as a generator for the private and public key of the Rainbow Signature
+ * Scheme.
+ * <p/>
+ * Detailed information about the key generation is to be found in the paper of
+ * Jintai Ding, Dieter Schmidt: Rainbow, a New Multivariable Polynomial
+ * Signature Scheme. ACNS 2005: 164-175 (http://dx.doi.org/10.1007/11496137_12)
+ */
+public class RainbowKeyPairGenerator
+ implements AsymmetricCipherKeyPairGenerator
+{
+ private boolean initialized = false;
+ private SecureRandom sr;
+ private RainbowKeyGenerationParameters rainbowParams;
+
+ /* linear affine map L1: */
+ private short[][] A1; // matrix of the lin. affine map L1(n-v1 x n-v1 matrix)
+ private short[][] A1inv; // inverted A1
+ private short[] b1; // translation element of the lin.affine map L1
+
+ /* linear affine map L2: */
+ private short[][] A2; // matrix of the lin. affine map (n x n matrix)
+ private short[][] A2inv; // inverted A2
+ private short[] b2; // translation elemt of the lin.affine map L2
+
+ /* components of F: */
+ private int numOfLayers; // u (number of sets S)
+ private Layer layers[]; // layers of polynomials of F
+ private int[] vi; // set of vinegar vars per layer.
+
+ /* components of Public Key */
+ private short[][] pub_quadratic; // quadratic(mixed) coefficients
+ private short[][] pub_singular; // singular coefficients
+ private short[] pub_scalar; // scalars
+
+ // TODO
+
+ /**
+ * The standard constructor tries to generate the Rainbow algorithm identifier
+ * with the corresponding OID.
+ * <p/>
+ */
+ public RainbowKeyPairGenerator()
+ {
+ }
+
+
+ /**
+ * This function generates a Rainbow key pair.
+ *
+ * @return the generated key pair
+ */
+ public AsymmetricCipherKeyPair genKeyPair()
+ {
+ RainbowPrivateKeyParameters privKey;
+ RainbowPublicKeyParameters pubKey;
+
+ if (!initialized)
+ {
+ initializeDefault();
+ }
+
+ /* choose all coefficients at random */
+ keygen();
+
+ /* now marshall them to PrivateKey */
+ privKey = new RainbowPrivateKeyParameters(A1inv, b1, A2inv, b2, vi, layers);
+
+
+ /* marshall to PublicKey */
+ pubKey = new RainbowPublicKeyParameters(vi[vi.length - 1] - vi[0], pub_quadratic, pub_singular, pub_scalar);
+
+ return new AsymmetricCipherKeyPair(pubKey, privKey);
+ }
+
+ // TODO
+ public void initialize(
+ KeyGenerationParameters param)
+ {
+ this.rainbowParams = (RainbowKeyGenerationParameters)param;
+
+ // set source of randomness
+ this.sr = new SecureRandom();
+
+ // unmarshalling:
+ this.vi = this.rainbowParams.getParameters().getVi();
+ this.numOfLayers = this.rainbowParams.getParameters().getNumOfLayers();
+
+ this.initialized = true;
+ }
+
+ private void initializeDefault()
+ {
+ RainbowKeyGenerationParameters rbKGParams = new RainbowKeyGenerationParameters(new SecureRandom(), new RainbowParameters());
+ initialize(rbKGParams);
+ }
+
+ /**
+ * This function calls the functions for the random generation of the coefficients
+ * and the matrices needed for the private key and the method for computing the public key.
+ */
+ private void keygen()
+ {
+ generateL1();
+ generateL2();
+ generateF();
+ computePublicKey();
+ }
+
+ /**
+ * This function generates the invertible affine linear map L1 = A1*x + b1
+ * <p/>
+ * The translation part b1, is stored in a separate array. The inverse of
+ * the matrix-part of L1 A1inv is also computed here.
+ * <p/>
+ * This linear map hides the output of the map F. It is on k^(n-v1).
+ */
+ private void generateL1()
+ {
+
+ // dimension = n-v1 = vi[last] - vi[first]
+ int dim = vi[vi.length - 1] - vi[0];
+ this.A1 = new short[dim][dim];
+ this.A1inv = null;
+ ComputeInField c = new ComputeInField();
+
+ /* generation of A1 at random */
+ while (A1inv == null)
+ {
+ for (int i = 0; i < dim; i++)
+ {
+ for (int j = 0; j < dim; j++)
+ {
+ A1[i][j] = (short)(sr.nextInt() & GF2Field.MASK);
+ }
+ }
+ A1inv = c.inverse(A1);
+ }
+
+ /* generation of the translation vector at random */
+ b1 = new short[dim];
+ for (int i = 0; i < dim; i++)
+ {
+ b1[i] = (short)(sr.nextInt() & GF2Field.MASK);
+ }
+ }
+
+ /**
+ * This function generates the invertible affine linear map L2 = A2*x + b2
+ * <p/>
+ * The translation part b2, is stored in a separate array. The inverse of
+ * the matrix-part of L2 A2inv is also computed here.
+ * <p/>
+ * This linear map hides the output of the map F. It is on k^(n).
+ */
+ private void generateL2()
+ {
+
+ // dimension = n = vi[last]
+ int dim = vi[vi.length - 1];
+ this.A2 = new short[dim][dim];
+ this.A2inv = null;
+ ComputeInField c = new ComputeInField();
+
+ /* generation of A2 at random */
+ while (this.A2inv == null)
+ {
+ for (int i = 0; i < dim; i++)
+ {
+ for (int j = 0; j < dim; j++)
+ { // one col extra for b
+ A2[i][j] = (short)(sr.nextInt() & GF2Field.MASK);
+ }
+ }
+ this.A2inv = c.inverse(A2);
+ }
+ /* generation of the translation vector at random */
+ b2 = new short[dim];
+ for (int i = 0; i < dim; i++)
+ {
+ b2[i] = (short)(sr.nextInt() & GF2Field.MASK);
+ }
+
+ }
+
+ /**
+ * This function generates the private map F, which consists of u-1 layers.
+ * Each layer consists of oi polynomials where oi = vi[i+1]-vi[i].
+ * <p/>
+ * The methods for the generation of the coefficients of these polynomials
+ * are called here.
+ */
+ private void generateF()
+ {
+
+ this.layers = new Layer[this.numOfLayers];
+ for (int i = 0; i < this.numOfLayers; i++)
+ {
+ layers[i] = new Layer(this.vi[i], this.vi[i + 1], sr);
+ }
+ }
+
+ /**
+ * This function computes the public key from the private key.
+ * <p/>
+ * The composition of F with L2 is computed, followed by applying L1 to the
+ * composition's result. The singular and scalar values constitute to the
+ * public key as is, the quadratic terms are compacted in
+ * <tt>compactPublicKey()</tt>
+ */
+ private void computePublicKey()
+ {
+
+ ComputeInField c = new ComputeInField();
+ int rows = this.vi[this.vi.length - 1] - this.vi[0];
+ int vars = this.vi[this.vi.length - 1];
+ // Fpub
+ short[][][] coeff_quadratic_3dim = new short[rows][vars][vars];
+ this.pub_singular = new short[rows][vars];
+ this.pub_scalar = new short[rows];
+
+ // Coefficients of layers of Private Key F
+ short[][][] coeff_alpha;
+ short[][][] coeff_beta;
+ short[][] coeff_gamma;
+ short[] coeff_eta;
+
+ // Needed for counters;
+ int oils = 0;
+ int vins = 0;
+ int crnt_row = 0; // current row (polynomial)
+
+ short vect_tmp[] = new short[vars]; // vector tmp;
+ short sclr_tmp = 0;
+
+ // Composition of F and L2: Insert L2 = A2*x+b2 in F
+ for (int l = 0; l < this.layers.length; l++)
+ {
+ // get coefficients of current layer
+ coeff_alpha = this.layers[l].getCoeffAlpha();
+ coeff_beta = this.layers[l].getCoeffBeta();
+ coeff_gamma = this.layers[l].getCoeffGamma();
+ coeff_eta = this.layers[l].getCoeffEta();
+ oils = coeff_alpha[0].length;// this.layers[l].getOi();
+ vins = coeff_beta[0].length;// this.layers[l].getVi();
+ // compute polynomials of layer
+ for (int p = 0; p < oils; p++)
+ {
+ // multiply alphas
+ for (int x1 = 0; x1 < oils; x1++)
+ {
+ for (int x2 = 0; x2 < vins; x2++)
+ {
+ // multiply polynomial1 with polynomial2
+ vect_tmp = c.multVect(coeff_alpha[p][x1][x2],
+ this.A2[x1 + vins]);
+ coeff_quadratic_3dim[crnt_row + p] = c.addSquareMatrix(
+ coeff_quadratic_3dim[crnt_row + p], c
+ .multVects(vect_tmp, this.A2[x2]));
+ // mul poly1 with scalar2
+ vect_tmp = c.multVect(this.b2[x2], vect_tmp);
+ this.pub_singular[crnt_row + p] = c.addVect(vect_tmp,
+ this.pub_singular[crnt_row + p]);
+ // mul scalar1 with poly2
+ vect_tmp = c.multVect(coeff_alpha[p][x1][x2],
+ this.A2[x2]);
+ vect_tmp = c.multVect(b2[x1 + vins], vect_tmp);
+ this.pub_singular[crnt_row + p] = c.addVect(vect_tmp,
+ this.pub_singular[crnt_row + p]);
+ // mul scalar1 with scalar2
+ sclr_tmp = GF2Field.multElem(coeff_alpha[p][x1][x2],
+ this.b2[x1 + vins]);
+ this.pub_scalar[crnt_row + p] = GF2Field.addElem(
+ this.pub_scalar[crnt_row + p], GF2Field
+ .multElem(sclr_tmp, this.b2[x2]));
+ }
+ }
+ // multiply betas
+ for (int x1 = 0; x1 < vins; x1++)
+ {
+ for (int x2 = 0; x2 < vins; x2++)
+ {
+ // multiply polynomial1 with polynomial2
+ vect_tmp = c.multVect(coeff_beta[p][x1][x2],
+ this.A2[x1]);
+ coeff_quadratic_3dim[crnt_row + p] = c.addSquareMatrix(
+ coeff_quadratic_3dim[crnt_row + p], c
+ .multVects(vect_tmp, this.A2[x2]));
+ // mul poly1 with scalar2
+ vect_tmp = c.multVect(this.b2[x2], vect_tmp);
+ this.pub_singular[crnt_row + p] = c.addVect(vect_tmp,
+ this.pub_singular[crnt_row + p]);
+ // mul scalar1 with poly2
+ vect_tmp = c.multVect(coeff_beta[p][x1][x2],
+ this.A2[x2]);
+ vect_tmp = c.multVect(this.b2[x1], vect_tmp);
+ this.pub_singular[crnt_row + p] = c.addVect(vect_tmp,
+ this.pub_singular[crnt_row + p]);
+ // mul scalar1 with scalar2
+ sclr_tmp = GF2Field.multElem(coeff_beta[p][x1][x2],
+ this.b2[x1]);
+ this.pub_scalar[crnt_row + p] = GF2Field.addElem(
+ this.pub_scalar[crnt_row + p], GF2Field
+ .multElem(sclr_tmp, this.b2[x2]));
+ }
+ }
+ // multiply gammas
+ for (int n = 0; n < vins + oils; n++)
+ {
+ // mul poly with scalar
+ vect_tmp = c.multVect(coeff_gamma[p][n], this.A2[n]);
+ this.pub_singular[crnt_row + p] = c.addVect(vect_tmp,
+ this.pub_singular[crnt_row + p]);
+ // mul scalar with scalar
+ this.pub_scalar[crnt_row + p] = GF2Field.addElem(
+ this.pub_scalar[crnt_row + p], GF2Field.multElem(
+ coeff_gamma[p][n], this.b2[n]));
+ }
+ // add eta
+ this.pub_scalar[crnt_row + p] = GF2Field.addElem(
+ this.pub_scalar[crnt_row + p], coeff_eta[p]);
+ }
+ crnt_row = crnt_row + oils;
+ }
+
+ // Apply L1 = A1*x+b1 to composition of F and L2
+ {
+ // temporary coefficient arrays
+ short[][][] tmp_c_quad = new short[rows][vars][vars];
+ short[][] tmp_c_sing = new short[rows][vars];
+ short[] tmp_c_scal = new short[rows];
+ for (int r = 0; r < rows; r++)
+ {
+ for (int q = 0; q < A1.length; q++)
+ {
+ tmp_c_quad[r] = c.addSquareMatrix(tmp_c_quad[r], c
+ .multMatrix(A1[r][q], coeff_quadratic_3dim[q]));
+ tmp_c_sing[r] = c.addVect(tmp_c_sing[r], c.multVect(
+ A1[r][q], this.pub_singular[q]));
+ tmp_c_scal[r] = GF2Field.addElem(tmp_c_scal[r], GF2Field
+ .multElem(A1[r][q], this.pub_scalar[q]));
+ }
+ tmp_c_scal[r] = GF2Field.addElem(tmp_c_scal[r], b1[r]);
+ }
+ // set public key
+ coeff_quadratic_3dim = tmp_c_quad;
+ this.pub_singular = tmp_c_sing;
+ this.pub_scalar = tmp_c_scal;
+ }
+ compactPublicKey(coeff_quadratic_3dim);
+ }
+
+ /**
+ * The quadratic (or mixed) terms of the public key are compacted from a n x
+ * n matrix per polynomial to an upper diagonal matrix stored in one integer
+ * array of n (n + 1) / 2 elements per polynomial. The ordering of elements
+ * is lexicographic and the result is updating <tt>this.pub_quadratic</tt>,
+ * which stores the quadratic elements of the public key.
+ *
+ * @param coeff_quadratic_to_compact 3-dimensional array containing a n x n Matrix for each of the
+ * n - v1 polynomials
+ */
+ private void compactPublicKey(short[][][] coeff_quadratic_to_compact)
+ {
+ int polynomials = coeff_quadratic_to_compact.length;
+ int n = coeff_quadratic_to_compact[0].length;
+ int entries = n * (n + 1) / 2;// the small gauss
+ this.pub_quadratic = new short[polynomials][entries];
+ int offset = 0;
+
+ for (int p = 0; p < polynomials; p++)
+ {
+ offset = 0;
+ for (int x = 0; x < n; x++)
+ {
+ for (int y = x; y < n; y++)
+ {
+ if (y == x)
+ {
+ this.pub_quadratic[p][offset] = coeff_quadratic_to_compact[p][x][y];
+ }
+ else
+ {
+ this.pub_quadratic[p][offset] = GF2Field.addElem(
+ coeff_quadratic_to_compact[p][x][y],
+ coeff_quadratic_to_compact[p][y][x]);
+ }
+ offset++;
+ }
+ }
+ }
+ }
+
+ public void init(KeyGenerationParameters param)
+ {
+ this.initialize(param);
+ }
+
+ public AsymmetricCipherKeyPair generateKeyPair()
+ {
+ return genKeyPair();
+ }
+}